Carnation DB

Dca36182.1

Annotation

8-exons
f-1
sp|B9N515_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_828007#GO:0031461;GO:0031625;GO:0006511#1F1P1C
Os01t0369000-02 Similar to Cullin-1.
Repeat List (scaffold38)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36182.1	4	268	301	33.22	265	38	7e-51
Target_name	Start	End	Length	Cov(%)
sp\|B9N515_POPTR	8	272	744	35.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36182.1	4	268	301	32.55	265	37	1e-50
Target_name	Start	End	Length	Cov(%)
Os01t0369000-02	8	272	745	35.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold38	Augus-PASA	mRNA	85478	88551	.	+	.	ID=Dca36182.1;Parent=Dca36182
scaffold38	Augus-PASA	exon	85478	85605	.	+	.	ID=Dca36182.1.exon1;Parent=Dca36182.1
scaffold38	Augus-PASA	exon	85694	85793	.	+	.	ID=Dca36182.1.exon2;Parent=Dca36182.1
scaffold38	Augus-PASA	exon	86438	86623	.	+	.	ID=Dca36182.1.exon3;Parent=Dca36182.1
scaffold38	Augus-PASA	exon	86727	86774	.	+	.	ID=Dca36182.1.exon4;Parent=Dca36182.1
scaffold38	Augus-PASA	exon	86864	87067	.	+	.	ID=Dca36182.1.exon5;Parent=Dca36182.1
scaffold38	Augus-PASA	exon	87332	87409	.	+	.	ID=Dca36182.1.exon6;Parent=Dca36182.1
scaffold38	Augus-PASA	exon	87806	87895	.	+	.	ID=Dca36182.1.exon7;Parent=Dca36182.1
scaffold38	Augus-PASA	exon	88480	88551	.	+	.	ID=Dca36182.1.exon8;Parent=Dca36182.1