Carnation DB

Dca36208.1

Annotation

12-exons
f-1
sp|F6HUY2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0066g01000#GO:0016021;GO:0005215#1F0P1C
AT3G01550.1 | Symbols: ATPPT2, PPT2 | phosphoenolpyruvate (pep)/phosphate translocator 2 | chr3:216947-218856 REVERSE LENGTH=383
Repeat List (scaffold38)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36208.1	515	843	843	27.99	329	72	3e-138
Target_name	Start	End	Length	Cov(%)
sp\|F6HUY2_VITVI	105	431	431	75.87

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36208.1	515	837	843	26.45	323	70	1e-125
Target_name	Start	End	Length	Cov(%)
AT3G01550.1	55	375	383	83.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold38	Augus-PASA	mRNA	278178	285029	.	-	.	ID=Dca36208.1;Parent=Dca36208
scaffold38	Augus-PASA	exon	278178	278254	.	-	.	ID=Dca36208.1.exon1;Parent=Dca36208.1
scaffold38	Augus-PASA	exon	278698	278827	.	-	.	ID=Dca36208.1.exon2;Parent=Dca36208.1
scaffold38	Augus-PASA	exon	279256	279333	.	-	.	ID=Dca36208.1.exon3;Parent=Dca36208.1
scaffold38	Augus-PASA	exon	279471	279590	.	-	.	ID=Dca36208.1.exon4;Parent=Dca36208.1
scaffold38	Augus-PASA	exon	279956	280040	.	-	.	ID=Dca36208.1.exon5;Parent=Dca36208.1
scaffold38	Augus-PASA	exon	280158	280243	.	-	.	ID=Dca36208.1.exon6;Parent=Dca36208.1
scaffold38	Augus-PASA	exon	280582	280734	.	-	.	ID=Dca36208.1.exon7;Parent=Dca36208.1
scaffold38	Augus-PASA	exon	280860	280982	.	-	.	ID=Dca36208.1.exon8;Parent=Dca36208.1
scaffold38	Augustus	exon	281215	281474	.	-	.	ID=Dca36208.1.exon9;Parent=Dca36208.1
scaffold38	Augustus	exon	283428	284148	.	-	.	ID=Dca36208.1.exon10;Parent=Dca36208.1
scaffold38	Augustus	exon	284236	284411	.	-	.	ID=Dca36208.1.exon11;Parent=Dca36208.1
scaffold38	Augustus	exon	284507	285029	.	-	.	ID=Dca36208.1.exon12;Parent=Dca36208.1