Carnation DB

Dca36213.1

Annotation

10-exons
f-1
sp|B9I849_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_729740#GO:0005198#1F0P0C
AT1G51270.3 | Symbols: | structural molecules;transmembrane receptors;structural molecules | chr1:19007577-19011225 FORWARD LENGTH=637
Repeat List (scaffold38)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36213.1	57	116	359	10.58	60	64	7e-15
Target_name	Start	End	Length	Cov(%)
sp\|B9I849_POPTR	39	98	240	25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36213.1	182	267	359	10.3	86	42	4e-15
Target_name	Start	End	Length	Cov(%)
AT1G51270.3	41	129	637	13.97

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold38	Augustus	mRNA	319514	328080	.	+	.	ID=Dca36213.1;Parent=Dca36213
scaffold38	Augustus	exon	319514	319593	.	+	.	ID=Dca36213.1.exon1;Parent=Dca36213.1
scaffold38	Augustus	exon	320006	320096	.	+	.	ID=Dca36213.1.exon2;Parent=Dca36213.1
scaffold38	Augustus	exon	322450	322531	.	+	.	ID=Dca36213.1.exon3;Parent=Dca36213.1
scaffold38	Augustus	exon	322691	322814	.	+	.	ID=Dca36213.1.exon4;Parent=Dca36213.1
scaffold38	Augustus	exon	323014	323182	.	+	.	ID=Dca36213.1.exon5;Parent=Dca36213.1
scaffold38	Augustus	exon	325992	326073	.	+	.	ID=Dca36213.1.exon6;Parent=Dca36213.1
scaffold38	Augustus	exon	326994	327100	.	+	.	ID=Dca36213.1.exon7;Parent=Dca36213.1
scaffold38	Augus-PASA	exon	327195	327392	.	+	.	ID=Dca36213.1.exon8;Parent=Dca36213.1
scaffold38	Augus-PASA	exon	327492	327569	.	+	.	ID=Dca36213.1.exon9;Parent=Dca36213.1
scaffold38	Augus-PASA	exon	328012	328080	.	+	.	ID=Dca36213.1.exon10;Parent=Dca36213.1