Carnation DB

Dca36246.1

Annotation

8-exons
f-1
sp|A9PC87_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0005737;GO:0004427;GO:0000287;GO:0006796#2F1P1C
AT3G53620.1 | Symbols: AtPPa4, PPa4 | pyrophosphorylase 4 | chr3:19881491-19883308 FORWARD LENGTH=216
Repeat List (scaffold38)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36246.1	1	220	220	83.18	220	84	8e-104
Target_name	Start	End	Length	Cov(%)
sp\|A9PC87_POPTR	8	220	220	96.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36246.1	26	220	220	76.36	195	87	4e-101
Target_name	Start	End	Length	Cov(%)
AT3G53620.1	22	216	216	90.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold38	Augus-PASA	mRNA	617724	620338	.	-	.	ID=Dca36246.1;Parent=Dca36246
scaffold38	Augus-PASA	exon	617724	617766	.	-	.	ID=Dca36246.1.exon1;Parent=Dca36246.1
scaffold38	Augus-PASA	exon	617879	617960	.	-	.	ID=Dca36246.1.exon2;Parent=Dca36246.1
scaffold38	Augus-PASA	exon	618351	618471	.	-	.	ID=Dca36246.1.exon3;Parent=Dca36246.1
scaffold38	Augus-PASA	exon	618707	618772	.	-	.	ID=Dca36246.1.exon4;Parent=Dca36246.1
scaffold38	Augus-PASA	exon	618867	618974	.	-	.	ID=Dca36246.1.exon5;Parent=Dca36246.1
scaffold38	Augus-PASA	exon	619323	619388	.	-	.	ID=Dca36246.1.exon6;Parent=Dca36246.1
scaffold38	Augus-PASA	exon	619846	619874	.	-	.	ID=Dca36246.1.exon7;Parent=Dca36246.1
scaffold38	Augustus	exon	620191	620338	.	-	.	ID=Dca36246.1.exon8;Parent=Dca36246.1