Carnation DB

Dca36305.1

Annotation

33-exons
f-1
sp|B9RWZ4_RICCO#Cation-transporting atpase plant, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1707830#GO:0016021;GO:0005524;GO:0005388;GO:0005516;GO:0046872;GO:0006754#4F1P1C
Repeat List (scaffold3802)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36305.1	3	1076	1098	59.38	1074	59	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RWZ4_RICCO	2	1055	1075	98.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36305.1	8	1074	1098	57.37	1067	58	0
Target_name	Start	End	Length	Cov(%)
AT5G57110.1	7	1048	1074	97.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3802	Augus-PASA	mRNA	537	12980	.	-	.	ID=Dca36305.1;Parent=Dca36305
scaffold3802	Augus-PASA	exon	537	651	.	-	.	ID=Dca36305.1.exon1;Parent=Dca36305.1
scaffold3802	Augus-PASA	exon	737	828	.	-	.	ID=Dca36305.1.exon2;Parent=Dca36305.1
scaffold3802	Augus-PASA	exon	932	1039	.	-	.	ID=Dca36305.1.exon3;Parent=Dca36305.1
scaffold3802	Augus-PASA	exon	1224	1358	.	-	.	ID=Dca36305.1.exon4;Parent=Dca36305.1
scaffold3802	Augus-PASA	exon	1454	1499	.	-	.	ID=Dca36305.1.exon5;Parent=Dca36305.1
scaffold3802	Augus-PASA	exon	1635	1735	.	-	.	ID=Dca36305.1.exon6;Parent=Dca36305.1
scaffold3802	Augus-PASA	exon	1842	1979	.	-	.	ID=Dca36305.1.exon7;Parent=Dca36305.1
scaffold3802	Augus-PASA	exon	2941	3039	.	-	.	ID=Dca36305.1.exon8;Parent=Dca36305.1
scaffold3802	Augustus	exon	3365	3481	.	-	.	ID=Dca36305.1.exon9;Parent=Dca36305.1
scaffold3802	Augustus	exon	3649	3813	.	-	.	ID=Dca36305.1.exon10;Parent=Dca36305.1
scaffold3802	Augustus	exon	4529	4588	.	-	.	ID=Dca36305.1.exon11;Parent=Dca36305.1
scaffold3802	Augustus	exon	4708	4911	.	-	.	ID=Dca36305.1.exon12;Parent=Dca36305.1
scaffold3802	Augustus	exon	5000	5110	.	-	.	ID=Dca36305.1.exon13;Parent=Dca36305.1
scaffold3802	Augustus	exon	5220	5330	.	-	.	ID=Dca36305.1.exon14;Parent=Dca36305.1
scaffold3802	Augustus	exon	5480	5578	.	-	.	ID=Dca36305.1.exon15;Parent=Dca36305.1
scaffold3802	Augustus	exon	5678	5743	.	-	.	ID=Dca36305.1.exon16;Parent=Dca36305.1
scaffold3802	Augustus	exon	5839	5976	.	-	.	ID=Dca36305.1.exon17;Parent=Dca36305.1
scaffold3802	Augustus	exon	7660	7702	.	-	.	ID=Dca36305.1.exon18;Parent=Dca36305.1
scaffold3802	Augustus	exon	7829	7884	.	-	.	ID=Dca36305.1.exon19;Parent=Dca36305.1
scaffold3802	Augustus	exon	7966	8071	.	-	.	ID=Dca36305.1.exon20;Parent=Dca36305.1
scaffold3802	Augustus	exon	8153	8235	.	-	.	ID=Dca36305.1.exon21;Parent=Dca36305.1
scaffold3802	Augustus	exon	8352	8435	.	-	.	ID=Dca36305.1.exon22;Parent=Dca36305.1
scaffold3802	Augustus	exon	9053	9124	.	-	.	ID=Dca36305.1.exon23;Parent=Dca36305.1
scaffold3802	Augustus	exon	9226	9309	.	-	.	ID=Dca36305.1.exon24;Parent=Dca36305.1
scaffold3802	Augustus	exon	9396	9479	.	-	.	ID=Dca36305.1.exon25;Parent=Dca36305.1
scaffold3802	Augustus	exon	9583	9653	.	-	.	ID=Dca36305.1.exon26;Parent=Dca36305.1
scaffold3802	Augustus	exon	9781	9850	.	-	.	ID=Dca36305.1.exon27;Parent=Dca36305.1
scaffold3802	Augustus	exon	9962	10051	.	-	.	ID=Dca36305.1.exon28;Parent=Dca36305.1
scaffold3802	Augustus	exon	10151	10285	.	-	.	ID=Dca36305.1.exon29;Parent=Dca36305.1
scaffold3802	Augustus	exon	10939	11045	.	-	.	ID=Dca36305.1.exon30;Parent=Dca36305.1
scaffold3802	Augustus	exon	11192	11228	.	-	.	ID=Dca36305.1.exon31;Parent=Dca36305.1
scaffold3802	Augustus	exon	11328	11444	.	-	.	ID=Dca36305.1.exon32;Parent=Dca36305.1
scaffold3802	Augustus	exon	12828	12980	.	-	.	ID=Dca36305.1.exon33;Parent=Dca36305.1