Dca36327.1
Annotation
- 4-exons
- f-1
- sp|B9H7P2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_559341#unknown#0F0P0C
- Os01t0248500-01 Similar to Pathogen-related protein.
- Repeat List (scaffold3806)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36327.1 |
4 |
196 |
309 |
41.42 |
193 |
67 |
3e-73
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H7P2_POPTR |
8 |
200 |
238 |
81.09 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36327.1 |
3 |
196 |
309 |
36.56 |
194 |
59 |
2e-62
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0248500-01 |
10 |
202 |
241 |
80.08 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3806 |
Augus-PASA |
mRNA |
17657 |
19829 |
. |
+ |
. |
ID=Dca36327.1;Parent=Dca36327 |
| scaffold3806 |
Augus-PASA |
exon |
17657 |
17782 |
. |
+ |
. |
ID=Dca36327.1.exon1;Parent=Dca36327.1 |
| scaffold3806 |
Augus-PASA |
exon |
18060 |
18192 |
. |
+ |
. |
ID=Dca36327.1.exon2;Parent=Dca36327.1 |
| scaffold3806 |
Augustus |
exon |
18275 |
18576 |
. |
+ |
. |
ID=Dca36327.1.exon3;Parent=Dca36327.1 |
| scaffold3806 |
Augustus |
exon |
19461 |
19829 |
. |
+ |
. |
ID=Dca36327.1.exon4;Parent=Dca36327.1 |
