Carnation DB

Dca36338.1

Annotation

5-exons
f-1
sp|B9I441_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_773305#GO:0005634;GO:0016818;GO:0003676;GO:0008081;GO:0008270;GO:0006281#4F1P1C
sp|Q7XVF7_ORYSJ#OSJNBb0118P14.6 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBb0118P14.6#GO:0005634;GO:0016818;GO:0003676;GO:0008081;GO:0008270;GO:0006281#4F1P1C
Repeat List (scaffold381)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36338.1	59	90	131	15.26	32	63	9e-07
Target_name	Start	End	Length	Cov(%)
sp\|B9I441_POPTR	802	833	1131	2.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36338.1	54	90	131	17.55	37	63	4e-07
Target_name	Start	End	Length	Cov(%)
AT5G07400.1	742	778	1084	3.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold381	Augustus	mRNA	9527	12489	.	-	.	ID=Dca36338.1;Parent=Dca36338
scaffold381	Augustus	exon	9527	10036	.	-	.	ID=Dca36338.1.exon1;Parent=Dca36338.1
scaffold381	Augustus	exon	10558	10647	.	-	.	ID=Dca36338.1.exon2;Parent=Dca36338.1
scaffold381	Augustus	exon	11732	11841	.	-	.	ID=Dca36338.1.exon3;Parent=Dca36338.1
scaffold381	Augustus	exon	12093	12188	.	-	.	ID=Dca36338.1.exon4;Parent=Dca36338.1
scaffold381	Augustus	exon	12318	12489	.	-	.	ID=Dca36338.1.exon5;Parent=Dca36338.1