Carnation DB

Dca36339.1

Annotation

6-exons
f-1
sp|B9I441_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_773305#GO:0005634;GO:0016818;GO:0003676;GO:0008081;GO:0008270;GO:0006281#4F1P1C
sp|B9RA33_RICCO#Tyrosyl-DNA phosphodiesterase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1502980#GO:0005634;GO:0016818;GO:0003676;GO:0008081;GO:0008270;GO:0006281#4F1P1C
Repeat List (scaffold381)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36339.1	17	747	756	44.84	731	45	2e-150
Target_name	Start	End	Length	Cov(%)
sp\|B9I441_POPTR	32	748	1131	63.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36339.1	53	741	756	39.28	689	43	1e-138
Target_name	Start	End	Length	Cov(%)
AT5G07400.1	34	678	1084	59.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold381	Augustus	mRNA	12710	16438	.	-	.	ID=Dca36339.1;Parent=Dca36339
scaffold381	Augustus	exon	12710	12738	.	-	.	ID=Dca36339.1.exon1;Parent=Dca36339.1
scaffold381	Augustus	exon	12815	13067	.	-	.	ID=Dca36339.1.exon2;Parent=Dca36339.1
scaffold381	Augustus	exon	13450	13734	.	-	.	ID=Dca36339.1.exon3;Parent=Dca36339.1
scaffold381	Augustus	exon	14416	14560	.	-	.	ID=Dca36339.1.exon4;Parent=Dca36339.1
scaffold381	Augustus	exon	14793	14927	.	-	.	ID=Dca36339.1.exon5;Parent=Dca36339.1
scaffold381	Augustus	exon	15015	16438	.	-	.	ID=Dca36339.1.exon6;Parent=Dca36339.1