Dca36358.1
Annotation
- 2-exons
- f-1
- sp|Q7G508_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os10g08990#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold3810)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36358.1 |
1 |
344 |
344 |
62.5 |
344 |
57 |
5e-118
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q7G508_ORYSJ |
83 |
462 |
655 |
58.01 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36358.1 |
181 |
341 |
344 |
19.18 |
161 |
41 |
2e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
907 |
1067 |
1428 |
11.27 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3810 |
Augustus |
mRNA |
45330 |
46470 |
. |
- |
. |
ID=Dca36358.1;Parent=Dca36358 |
| scaffold3810 |
Augustus |
exon |
45330 |
45793 |
. |
- |
. |
ID=Dca36358.1.exon1;Parent=Dca36358.1 |
| scaffold3810 |
Augustus |
exon |
45900 |
46470 |
. |
- |
. |
ID=Dca36358.1.exon2;Parent=Dca36358.1 |
