Dca36363.1
Annotation
- 4-exons
- f-1
- sp|Q9AYI0_ORYSJ#Putative gag-pol polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0087H07.4#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold3811)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36363.1 |
52 |
504 |
504 |
40.07 |
453 |
43 |
1e-111
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9AYI0_ORYSJ |
493 |
969 |
1058 |
45.08 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36363.1 |
129 |
503 |
504 |
32.14 |
375 |
39 |
2e-86
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
96 |
513 |
1262 |
33.12 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3811 |
Augustus |
mRNA |
13216 |
15315 |
. |
+ |
. |
ID=Dca36363.1;Parent=Dca36363 |
| scaffold3811 |
Augustus |
exon |
13216 |
13264 |
. |
+ |
. |
ID=Dca36363.1.exon1;Parent=Dca36363.1 |
| scaffold3811 |
Augustus |
exon |
13639 |
13961 |
. |
+ |
. |
ID=Dca36363.1.exon2;Parent=Dca36363.1 |
| scaffold3811 |
Augustus |
exon |
14057 |
14507 |
. |
+ |
. |
ID=Dca36363.1.exon3;Parent=Dca36363.1 |
| scaffold3811 |
Augustus |
exon |
14624 |
15315 |
. |
+ |
. |
ID=Dca36363.1.exon4;Parent=Dca36363.1 |
