Carnation DB

Dca36383.1

Annotation

6-exons
f-1
sp|A5B1E1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_012059#GO:0003676;GO:0015074#1F1P0C
Os11t0656500-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold3818)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36383.1	71	779	779	29.13	709	31	9e-88
Target_name	Start	End	Length	Cov(%)
sp\|A5B1E1_VITVI	52	742	1128	61.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36383.1	445	777	779	13.99	333	32	2e-41
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	688	1013	1401	23.26

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3818	Augustus	mRNA	4609	8105	.	-	.	ID=Dca36383.1;Parent=Dca36383
scaffold3818	Augustus	exon	4609	5204	.	-	.	ID=Dca36383.1.exon1;Parent=Dca36383.1
scaffold3818	Augustus	exon	5355	5763	.	-	.	ID=Dca36383.1.exon2;Parent=Dca36383.1
scaffold3818	Augustus	exon	5959	6025	.	-	.	ID=Dca36383.1.exon3;Parent=Dca36383.1
scaffold3818	Augustus	exon	6670	7166	.	-	.	ID=Dca36383.1.exon4;Parent=Dca36383.1
scaffold3818	Augustus	exon	7265	7916	.	-	.	ID=Dca36383.1.exon5;Parent=Dca36383.1
scaffold3818	Augustus	exon	7987	8105	.	-	.	ID=Dca36383.1.exon6;Parent=Dca36383.1