Dca36388.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold38191)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36388.1 |
1 |
179 |
183 |
65.57 |
179 |
57 |
2e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
682 |
892 |
896 |
23.54 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36388.1 |
4 |
169 |
183 |
31.69 |
166 |
30 |
1e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1187 |
1382 |
1401 |
13.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold38191 |
Augustus |
mRNA |
3 |
650 |
. |
+ |
. |
ID=Dca36388.1;Parent=Dca36388 |
| scaffold38191 |
Augustus |
exon |
3 |
234 |
. |
+ |
. |
ID=Dca36388.1.exon1;Parent=Dca36388.1 |
| scaffold38191 |
Augustus |
exon |
331 |
650 |
. |
+ |
. |
ID=Dca36388.1.exon2;Parent=Dca36388.1 |
