Dca3677.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold11315)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3677.1 |
2 |
373 |
432 |
52.77 |
372 |
56 |
7e-128
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
135 |
546 |
964 |
42.73 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3677.1 |
284 |
370 |
432 |
9.49 |
87 |
48 |
4e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
927 |
1013 |
1428 |
6.09 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11315 |
Augustus |
mRNA |
9682 |
11087 |
. |
+ |
. |
ID=Dca3677.1;Parent=Dca3677 |
| scaffold11315 |
Augustus |
exon |
9682 |
10501 |
. |
+ |
. |
ID=Dca3677.1.exon1;Parent=Dca3677.1 |
| scaffold11315 |
Augustus |
exon |
10609 |
11087 |
. |
+ |
. |
ID=Dca3677.1.exon2;Parent=Dca3677.1 |
