Dca3720.1
Annotation
- 3-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold11331)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3720.1 |
157 |
526 |
532 |
43.23 |
370 |
56 |
8e-130
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
70 |
476 |
964 |
42.21 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3720.1 |
160 |
437 |
532 |
19.92 |
278 |
34 |
5e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
484 |
801 |
1428 |
22.26 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11331 |
Augustus |
mRNA |
2181 |
4287 |
. |
+ |
. |
ID=Dca3720.1;Parent=Dca3720 |
| scaffold11331 |
Augustus |
exon |
2181 |
2646 |
. |
+ |
. |
ID=Dca3720.1.exon1;Parent=Dca3720.1 |
| scaffold11331 |
Augustus |
exon |
3068 |
3508 |
. |
+ |
. |
ID=Dca3720.1.exon2;Parent=Dca3720.1 |
| scaffold11331 |
Augustus |
exon |
3596 |
4287 |
. |
+ |
. |
ID=Dca3720.1.exon3;Parent=Dca3720.1 |
