Carnation DB

Dca3738.1

Annotation

8-exons
f-1
sp|D7SZY3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0034g01820#GO:0005488#1F0P0C
sp|B9STG7_RICCO#Pentatricopeptide repeat-containing protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1320110#GO:0005488#1F0P0C
Repeat List (scaffold1134)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3738.1	1	520	531	58.94	520	60	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SZY3_VITVI	127	648	659	79.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3738.1	1	527	531	57.62	527	58	2e-175
Target_name	Start	End	Length	Cov(%)
AT1G10910.1	124	651	664	79.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1134	Augustus	mRNA	63488	69941	.	+	.	ID=Dca3738.1;Parent=Dca3738
scaffold1134	Augustus	exon	63488	63739	.	+	.	ID=Dca3738.1.exon1;Parent=Dca3738.1
scaffold1134	Augustus	exon	64127	64429	.	+	.	ID=Dca3738.1.exon2;Parent=Dca3738.1
scaffold1134	Augustus	exon	65057	65161	.	+	.	ID=Dca3738.1.exon3;Parent=Dca3738.1
scaffold1134	Augustus	exon	66601	66700	.	+	.	ID=Dca3738.1.exon4;Parent=Dca3738.1
scaffold1134	Augustus	exon	67228	67547	.	+	.	ID=Dca3738.1.exon5;Parent=Dca3738.1
scaffold1134	Augustus	exon	68662	68829	.	+	.	ID=Dca3738.1.exon6;Parent=Dca3738.1
scaffold1134	Augustus	exon	68915	69043	.	+	.	ID=Dca3738.1.exon7;Parent=Dca3738.1
scaffold1134	Augustus	exon	69723	69941	.	+	.	ID=Dca3738.1.exon8;Parent=Dca3738.1