Carnation DB

Dca3756.1

Annotation

7-exons
f-1
sp|D7L1W1_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_900313#unknown#0F0P0C
sp|Q9SIV6_ARATH#Expressed protein#Arabidopsis thaliana (Mouse-ear cress)#OrderedLocusNames=At2g16460#GO:0005739;GO:0005774;GO:0046872#1F0P2C
Repeat List (scaffold1135)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3756.1	1	236	236	70.76	236	70	7e-88
Target_name	Start	End	Length	Cov(%)
sp\|D7L1W1_ARALL	1	230	230	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3756.1	1	236	236	69.91	236	70	2e-88
Target_name	Start	End	Length	Cov(%)
AT2G16460.1	1	230	230	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1135	Augus-PASA	mRNA	38371	41485	.	-	.	ID=Dca3756.1;Parent=Dca3756
scaffold1135	Augus-PASA	exon	38371	38490	.	-	.	ID=Dca3756.1.exon1;Parent=Dca3756.1
scaffold1135	Augus-PASA	exon	38713	38779	.	-	.	ID=Dca3756.1.exon2;Parent=Dca3756.1
scaffold1135	Augus-PASA	exon	38863	38919	.	-	.	ID=Dca3756.1.exon3;Parent=Dca3756.1
scaffold1135	Augus-PASA	exon	39040	39116	.	-	.	ID=Dca3756.1.exon4;Parent=Dca3756.1
scaffold1135	Augus-PASA	exon	40454	40513	.	-	.	ID=Dca3756.1.exon5;Parent=Dca3756.1
scaffold1135	Augus-PASA	exon	40612	40743	.	-	.	ID=Dca3756.1.exon6;Parent=Dca3756.1
scaffold1135	Augus-PASA	exon	41288	41485	.	-	.	ID=Dca3756.1.exon7;Parent=Dca3756.1