Carnation DB

Dca37596.1

Annotation

26-exons
f-1
sp|B9NB39_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_279914#GO:0005874;GO:0005524;GO:0003777;GO:0007018#2F1P1C
AT5G47820.1 | Symbols: FRA1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:19366505-19372229 FORWARD LENGTH=1035
Repeat List (scaffold40)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37596.1	6	1156	1253	61.77	1151	63	0
Target_name	Start	End	Length	Cov(%)
sp\|B9NB39_POPTR	4	1224	1229	99.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37596.1	6	1156	1253	59.85	1151	60	0
Target_name	Start	End	Length	Cov(%)
AT5G60930.1	4	1244	1294	95.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold40	Augustus	mRNA	4024	12228	.	+	.	ID=Dca37596.1;Parent=Dca37596
scaffold40	Augustus	exon	4024	4140	.	+	.	ID=Dca37596.1.exon1;Parent=Dca37596.1
scaffold40	Augustus	exon	4240	4386	.	+	.	ID=Dca37596.1.exon2;Parent=Dca37596.1
scaffold40	Augustus	exon	4791	4943	.	+	.	ID=Dca37596.1.exon3;Parent=Dca37596.1
scaffold40	Augustus	exon	5036	5283	.	+	.	ID=Dca37596.1.exon4;Parent=Dca37596.1
scaffold40	Augustus	exon	5456	5631	.	+	.	ID=Dca37596.1.exon5;Parent=Dca37596.1
scaffold40	Augustus	exon	5917	6041	.	+	.	ID=Dca37596.1.exon6;Parent=Dca37596.1
scaffold40	Augustus	exon	6267	6303	.	+	.	ID=Dca37596.1.exon7;Parent=Dca37596.1
scaffold40	Augustus	exon	6418	6509	.	+	.	ID=Dca37596.1.exon8;Parent=Dca37596.1
scaffold40	Augustus	exon	6627	6743	.	+	.	ID=Dca37596.1.exon9;Parent=Dca37596.1
scaffold40	Augustus	exon	6829	6942	.	+	.	ID=Dca37596.1.exon10;Parent=Dca37596.1
scaffold40	Augustus	exon	7218	7419	.	+	.	ID=Dca37596.1.exon11;Parent=Dca37596.1
scaffold40	Augustus	exon	7600	7712	.	+	.	ID=Dca37596.1.exon12;Parent=Dca37596.1
scaffold40	Augustus	exon	7820	7918	.	+	.	ID=Dca37596.1.exon13;Parent=Dca37596.1
scaffold40	Augustus	exon	8016	8129	.	+	.	ID=Dca37596.1.exon14;Parent=Dca37596.1
scaffold40	Augustus	exon	8201	8317	.	+	.	ID=Dca37596.1.exon15;Parent=Dca37596.1
scaffold40	Augustus	exon	8397	8477	.	+	.	ID=Dca37596.1.exon16;Parent=Dca37596.1
scaffold40	Augustus	exon	9004	9097	.	+	.	ID=Dca37596.1.exon17;Parent=Dca37596.1
scaffold40	Augustus	exon	9179	9204	.	+	.	ID=Dca37596.1.exon18;Parent=Dca37596.1
scaffold40	Augustus	exon	9288	9376	.	+	.	ID=Dca37596.1.exon19;Parent=Dca37596.1
scaffold40	Augustus	exon	9573	9644	.	+	.	ID=Dca37596.1.exon20;Parent=Dca37596.1
scaffold40	Augustus	exon	9733	9960	.	+	.	ID=Dca37596.1.exon21;Parent=Dca37596.1
scaffold40	Augustus	exon	10432	10573	.	+	.	ID=Dca37596.1.exon22;Parent=Dca37596.1
scaffold40	Augustus	exon	10683	10718	.	+	.	ID=Dca37596.1.exon23;Parent=Dca37596.1
scaffold40	Augustus	exon	10829	11389	.	+	.	ID=Dca37596.1.exon24;Parent=Dca37596.1
scaffold40	Augustus	exon	11513	11685	.	+	.	ID=Dca37596.1.exon25;Parent=Dca37596.1
scaffold40	Augustus	exon	11940	12228	.	+	.	ID=Dca37596.1.exon26;Parent=Dca37596.1