Carnation DB

Dca38081.1

Annotation

8-exons
f-1
sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold4068)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38081.1	759	908	908	10.13	150	50	2e-41
Target_name	Start	End	Length	Cov(%)
sp\|G9FIF2_BETVU	1322	1506	1553	11.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38081.1	769	882	908	4.4	114	35	1e-09
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	1298	1409	1539	7.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4068	Augustus	mRNA	15903	21040	.	-	.	ID=Dca38081.1;Parent=Dca38081
scaffold4068	Augustus	exon	15903	15984	.	-	.	ID=Dca38081.1.exon1;Parent=Dca38081.1
scaffold4068	Augustus	exon	16082	16409	.	-	.	ID=Dca38081.1.exon2;Parent=Dca38081.1
scaffold4068	Augustus	exon	17167	17232	.	-	.	ID=Dca38081.1.exon3;Parent=Dca38081.1
scaffold4068	Augustus	exon	17656	17910	.	-	.	ID=Dca38081.1.exon4;Parent=Dca38081.1
scaffold4068	Augustus	exon	18692	18979	.	-	.	ID=Dca38081.1.exon5;Parent=Dca38081.1
scaffold4068	Augustus	exon	19121	19424	.	-	.	ID=Dca38081.1.exon6;Parent=Dca38081.1
scaffold4068	Augustus	exon	19551	20689	.	-	.	ID=Dca38081.1.exon7;Parent=Dca38081.1
scaffold4068	Augustus	exon	20776	21040	.	-	.	ID=Dca38081.1.exon8;Parent=Dca38081.1