Carnation DB

Dca38159.1

Annotation

6-exons
f-1
sp|D7TNM5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0026g00640#GO:0005524;GO:0008026;GO:0003676#3F0P0C
sp|B9S2K2_RICCO#Dead box ATP-dependent RNA helicase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0699960#GO:0005524;GO:0008026;GO:0003676#3F0P0C
Repeat List (scaffold408)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38159.1	38	484	492	56.7	447	62	1e-157
Target_name	Start	End	Length	Cov(%)
sp\|D7TNM5_VITVI	108	562	593	76.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38159.1	41	484	492	52.64	444	58	9e-145
Target_name	Start	End	Length	Cov(%)
AT1G59990.1	107	548	581	76.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold408	Augustus	mRNA	38641	41964	.	-	.	ID=Dca38159.1;Parent=Dca38159
scaffold408	Augustus	exon	38641	38820	.	-	.	ID=Dca38159.1.exon1;Parent=Dca38159.1
scaffold408	Augustus	exon	38971	39298	.	-	.	ID=Dca38159.1.exon2;Parent=Dca38159.1
scaffold408	Augustus	exon	39815	40251	.	-	.	ID=Dca38159.1.exon3;Parent=Dca38159.1
scaffold408	Augustus	exon	40354	40476	.	-	.	ID=Dca38159.1.exon4;Parent=Dca38159.1
scaffold408	Augustus	exon	40569	40856	.	-	.	ID=Dca38159.1.exon5;Parent=Dca38159.1
scaffold408	Augustus	exon	41842	41964	.	-	.	ID=Dca38159.1.exon6;Parent=Dca38159.1