Dca38198.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold4085)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38198.1 |
2 |
368 |
368 |
55.97 |
367 |
50 |
7e-111
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
67 |
473 |
964 |
42.21 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38198.1 |
16 |
260 |
368 |
25.81 |
245 |
33 |
1e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
492 |
779 |
1428 |
20.16 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4085 |
Augustus |
mRNA |
9852 |
11069 |
. |
- |
. |
ID=Dca38198.1;Parent=Dca38198 |
| scaffold4085 |
Augustus |
exon |
9852 |
10571 |
. |
- |
. |
ID=Dca38198.1.exon1;Parent=Dca38198.1 |
| scaffold4085 |
Augustus |
exon |
10683 |
11069 |
. |
- |
. |
ID=Dca38198.1.exon2;Parent=Dca38198.1 |
