Carnation DB

Dca38270.1

Annotation

18-exons
f-1
sp|B9GSG1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_711240#GO:0004814;GO:0005524;GO:0006420#2F1P0C
AT4G26300.1 | Symbols: emb1027 | Arginyl-tRNA synthetase, class Ic | chr4:13308400-13313109 REVERSE LENGTH=642
Repeat List (scaffold4098)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38270.1	107	692	692	63.58	586	75	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GSG1_POPTR	4	590	590	99.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38270.1	107	692	692	59.82	586	71	0
Target_name	Start	End	Length	Cov(%)
AT4G26300.1	56	642	642	91.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4098	Augus-PASA	mRNA	2663	15039	.	-	.	ID=Dca38270.1;Parent=Dca38270
scaffold4098	Augus-PASA	exon	2663	2773	.	-	.	ID=Dca38270.1.exon1;Parent=Dca38270.1
scaffold4098	Augus-PASA	exon	2870	2968	.	-	.	ID=Dca38270.1.exon2;Parent=Dca38270.1
scaffold4098	Augus-PASA	exon	3067	3135	.	-	.	ID=Dca38270.1.exon3;Parent=Dca38270.1
scaffold4098	Augus-PASA	exon	3359	3448	.	-	.	ID=Dca38270.1.exon4;Parent=Dca38270.1
scaffold4098	Augus-PASA	exon	4388	4457	.	-	.	ID=Dca38270.1.exon5;Parent=Dca38270.1
scaffold4098	Augus-PASA	exon	5022	5091	.	-	.	ID=Dca38270.1.exon6;Parent=Dca38270.1
scaffold4098	Augus-PASA	exon	5248	5434	.	-	.	ID=Dca38270.1.exon7;Parent=Dca38270.1
scaffold4098	Augus-PASA	exon	5744	5828	.	-	.	ID=Dca38270.1.exon8;Parent=Dca38270.1
scaffold4098	Augus-PASA	exon	6024	6202	.	-	.	ID=Dca38270.1.exon9;Parent=Dca38270.1
scaffold4098	Augus-PASA	exon	6394	6498	.	-	.	ID=Dca38270.1.exon10;Parent=Dca38270.1
scaffold4098	Augus-PASA	exon	6629	6712	.	-	.	ID=Dca38270.1.exon11;Parent=Dca38270.1
scaffold4098	Augustus	exon	7701	7781	.	-	.	ID=Dca38270.1.exon12;Parent=Dca38270.1
scaffold4098	PASA	exon	8448	8663	.	-	.	ID=Dca38270.1.exon13;Parent=Dca38270.1
scaffold4098	Augus-PASA	exon	8755	8856	.	-	.	ID=Dca38270.1.exon14;Parent=Dca38270.1
scaffold4098	Augus-PASA	exon	8948	9023	.	-	.	ID=Dca38270.1.exon15;Parent=Dca38270.1
scaffold4098	Augustus	exon	9104	9237	.	-	.	ID=Dca38270.1.exon16;Parent=Dca38270.1
scaffold4098	Augustus	exon	11221	11448	.	-	.	ID=Dca38270.1.exon17;Parent=Dca38270.1
scaffold4098	Augustus	exon	14947	15039	.	-	.	ID=Dca38270.1.exon18;Parent=Dca38270.1