Carnation DB

Dca38280.1

Annotation

5-exons
f-1
sp|A5BE55_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g03140#GO:0016788;GO:0006629#1F1P0C
AT3G16370.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superfamily protein | chr3:5556928-5558351 FORWARD LENGTH=353
Repeat List (scaffold41)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38280.1	32	357	358	74.58	326	82	8e-161
Target_name	Start	End	Length	Cov(%)
sp\|A5BE55_VITVI	30	355	356	91.57

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38280.1	32	357	358	64.24	326	71	3e-141
Target_name	Start	End	Length	Cov(%)
AT3G16370.1	27	352	353	92.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold41	Augus-PASA	mRNA	48409	50651	.	-	.	ID=Dca38280.1;Parent=Dca38280
scaffold41	Augus-PASA	exon	48409	48605	.	-	.	ID=Dca38280.1.exon1;Parent=Dca38280.1
scaffold41	Augus-PASA	exon	48800	49055	.	-	.	ID=Dca38280.1.exon2;Parent=Dca38280.1
scaffold41	Augus-PASA	exon	49658	49891	.	-	.	ID=Dca38280.1.exon3;Parent=Dca38280.1
scaffold41	Augus-PASA	exon	50090	50220	.	-	.	ID=Dca38280.1.exon4;Parent=Dca38280.1
scaffold41	Augus-PASA	exon	50393	50651	.	-	.	ID=Dca38280.1.exon5;Parent=Dca38280.1