Carnation DB

Dca3830.1

Annotation

6-exons
f-1
sp|Q8GTR1_CITUN#Geranylgeranyl diphosphate synthase#Citrus unshiu (Satsuma mandarin) (Citrus nobilis var unshiu)#Name=Ggps#GO:0016740;GO:0008299#1F1P0C
Repeat List (scaffold1138)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3830.1	1	184	184	85.86	184	86	7e-85
Target_name	Start	End	Length	Cov(%)
sp\|Q8GTR1_CITUN	139	317	426	42.01

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3830.1	1	184	184	75.54	184	76	1e-76
Target_name	Start	End	Length	Cov(%)
Os06t0678200-01	143	321	431	41.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1138	Augustus	mRNA	1	3172	.	-	.	ID=Dca3830.1;Parent=Dca3830
scaffold1138	Augustus	exon	1	39	.	-	.	ID=Dca3830.1.exon1;Parent=Dca3830.1
scaffold1138	Augustus	exon	762	894	.	-	.	ID=Dca3830.1.exon2;Parent=Dca3830.1
scaffold1138	Augustus	exon	1338	1423	.	-	.	ID=Dca3830.1.exon3;Parent=Dca3830.1
scaffold1138	Augustus	exon	1535	1606	.	-	.	ID=Dca3830.1.exon4;Parent=Dca3830.1
scaffold1138	Augustus	exon	2796	2882	.	-	.	ID=Dca3830.1.exon5;Parent=Dca3830.1
scaffold1138	Augustus	exon	3038	3172	.	-	.	ID=Dca3830.1.exon6;Parent=Dca3830.1