Carnation DB

Dca38300.1

Annotation

5-exons
f-1
sp|D7T5J2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0665g00030#unknown#0F0P0C
Repeat List (scaffold41)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38300.1	39	178	181	33.14	140	42	1e-24
Target_name	Start	End	Length	Cov(%)
sp\|D7T5J2_VITVI	116	261	262	55.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38300.1	123	171	181	18.23	49	68	2e-13
Target_name	Start	End	Length	Cov(%)
AT4G39900.1	185	233	245	20

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold41	Augus-PASA	mRNA	173966	175531	.	+	.	ID=Dca38300.1;Parent=Dca38300
scaffold41	Augus-PASA	exon	173966	173989	.	+	.	ID=Dca38300.1.exon1;Parent=Dca38300.1
scaffold41	Augus-PASA	exon	174294	174524	.	+	.	ID=Dca38300.1.exon2;Parent=Dca38300.1
scaffold41	Augus-PASA	exon	174637	174733	.	+	.	ID=Dca38300.1.exon3;Parent=Dca38300.1
scaffold41	Augus-PASA	exon	174852	174960	.	+	.	ID=Dca38300.1.exon4;Parent=Dca38300.1
scaffold41	Augus-PASA	exon	175447	175531	.	+	.	ID=Dca38300.1.exon5;Parent=Dca38300.1