Carnation DB

Dca38342.1

Annotation

5-exons
f-1
sp|A5B7X7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_017631#GO:0003676;GO:0015074#1F1P0C
Os11t0656500-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold410)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38342.1	2	626	628	52.22	625	46	3e-163
Target_name	Start	End	Length	Cov(%)
sp\|A5B7X7_VITVI	383	1083	1191	58.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38342.1	469	618	628	10.35	150	44	1e-27
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	1241	1389	1401	10.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold410	Augustus	mRNA	59405	61852	.	+	.	ID=Dca38342.1;Parent=Dca38342
scaffold410	Augustus	exon	59405	60179	.	+	.	ID=Dca38342.1.exon1;Parent=Dca38342.1
scaffold410	Augustus	exon	60307	60683	.	+	.	ID=Dca38342.1.exon2;Parent=Dca38342.1
scaffold410	Augustus	exon	60771	60908	.	+	.	ID=Dca38342.1.exon3;Parent=Dca38342.1
scaffold410	Augustus	exon	61053	61152	.	+	.	ID=Dca38342.1.exon4;Parent=Dca38342.1
scaffold410	Augustus	exon	61356	61852	.	+	.	ID=Dca38342.1.exon5;Parent=Dca38342.1