Carnation DB

Dca38394.1

Annotation

7-exons
f-1
sp|B9MTW9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_826584#GO:0005737;GO:0005524;GO:0003677;GO:0004386;GO:0008270;GO:0000184#4F1P1C
Os03t0787300-01 Similar to DnaJ homolog.
Repeat List (scaffold4108)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38394.1	107	169	237	18.98	63	72	6e-20
Target_name	Start	End	Length	Cov(%)
sp\|B9MTW9_POPTR	1151	1213	1256	5.01

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38394.1	186	237	237	17.72	52	81	9e-18
Target_name	Start	End	Length	Cov(%)
Os03t0787300-01	207	258	418	12.44

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4108	Augustus	mRNA	183	3436	.	+	.	ID=Dca38394.1;Parent=Dca38394
scaffold4108	Augustus	exon	183	290	.	+	.	ID=Dca38394.1.exon1;Parent=Dca38394.1
scaffold4108	Augustus	exon	1186	1193	.	+	.	ID=Dca38394.1.exon2;Parent=Dca38394.1
scaffold4108	Augustus	exon	1330	1600	.	+	.	ID=Dca38394.1.exon3;Parent=Dca38394.1
scaffold4108	Augustus	exon	1675	1794	.	+	.	ID=Dca38394.1.exon4;Parent=Dca38394.1
scaffold4108	Augustus	exon	3028	3078	.	+	.	ID=Dca38394.1.exon5;Parent=Dca38394.1
scaffold4108	Augustus	exon	3196	3303	.	+	.	ID=Dca38394.1.exon6;Parent=Dca38394.1
scaffold4108	Augustus	exon	3389	3436	.	+	.	ID=Dca38394.1.exon7;Parent=Dca38394.1