Carnation DB

Dca384.1

Annotation

6-exons
f-1
sp|A5BSC1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_030567#GO:0003676;GO:0008270;GO:0015074#2F1P0C
sp|A2I5F8_BETVU#Integrase#Beta vulgaris (Sugar beet)#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold1004)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca384.1	160	404	574	12.89	245	30	4e-22
Target_name	Start	End	Length	Cov(%)
sp\|A5BSC1_VITVI	492	741	2203	11.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca384.1	428	500	574	7.49	73	59	8e-18
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	939	1011	1401	5.21

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1004	Augustus	mRNA	73669	80555	.	+	.	ID=Dca384.1;Parent=Dca384
scaffold1004	Augustus	exon	73669	73848	.	+	.	ID=Dca384.1.exon1;Parent=Dca384.1
scaffold1004	Augustus	exon	74887	75091	.	+	.	ID=Dca384.1.exon2;Parent=Dca384.1
scaffold1004	Augustus	exon	75362	76273	.	+	.	ID=Dca384.1.exon3;Parent=Dca384.1
scaffold1004	Augustus	exon	76775	76974	.	+	.	ID=Dca384.1.exon4;Parent=Dca384.1
scaffold1004	Augustus	exon	79932	80102	.	+	.	ID=Dca384.1.exon5;Parent=Dca384.1
scaffold1004	Augustus	exon	80499	80555	.	+	.	ID=Dca384.1.exon6;Parent=Dca384.1