Carnation DB

Dca38400.1

Annotation

9-exons
f-1
sp|G7JE91_MEDTR#Putative uncharacterized protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_4g129180#unknown#0F0P0C
AT5G57700.3 | Symbols: | BNR/Asp-box repeat family protein | chr5:23375257-23376943 FORWARD LENGTH=358
Repeat List (scaffold411)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38400.1	28	339	346	64.45	312	71	6e-126
Target_name	Start	End	Length	Cov(%)
sp\|G7JE91_MEDTR	19	334	354	89.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38400.1	38	346	346	62.42	309	66	1e-121
Target_name	Start	End	Length	Cov(%)
AT5G57700.3	4	330	358	91.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold411	Augus-PASA	mRNA	53934	56866	.	+	.	ID=Dca38400.1;Parent=Dca38400
scaffold411	Augus-PASA	exon	53934	54031	.	+	.	ID=Dca38400.1.exon1;Parent=Dca38400.1
scaffold411	Augus-PASA	exon	54108	54231	.	+	.	ID=Dca38400.1.exon2;Parent=Dca38400.1
scaffold411	Augus-PASA	exon	54386	54472	.	+	.	ID=Dca38400.1.exon3;Parent=Dca38400.1
scaffold411	Augus-PASA	exon	54716	54840	.	+	.	ID=Dca38400.1.exon4;Parent=Dca38400.1
scaffold411	Augus-PASA	exon	55444	55540	.	+	.	ID=Dca38400.1.exon5;Parent=Dca38400.1
scaffold411	Augus-PASA	exon	55626	55703	.	+	.	ID=Dca38400.1.exon6;Parent=Dca38400.1
scaffold411	Augus-PASA	exon	55806	56025	.	+	.	ID=Dca38400.1.exon7;Parent=Dca38400.1
scaffold411	Augustus	exon	56351	56538	.	+	.	ID=Dca38400.1.exon8;Parent=Dca38400.1
scaffold411	Augus-PASA	exon	56843	56866	.	+	.	ID=Dca38400.1.exon9;Parent=Dca38400.1