Carnation DB

Dca3849.1

Annotation

5-exons
f-1
sp|B9RHB0_RICCO#Coatomer alpha subunit, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1449180#GO:0030126;GO:0016905;GO:0005198;GO:0006886;GO:0016192#2F2P1C
Repeat List (scaffold1139)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3849.1	1	1214	1244	80.3	1214	82	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RHB0_RICCO	1	1217	1217	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3849.1	1	1214	1244	78.69	1214	81	0
Target_name	Start	End	Length	Cov(%)
AT1G62020.1	1	1216	1216	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1139	Augustus	mRNA	20919	30560	.	+	.	ID=Dca3849.1;Parent=Dca3849
scaffold1139	Augustus	exon	20919	21126	.	+	.	ID=Dca3849.1.exon1;Parent=Dca3849.1
scaffold1139	Augustus	exon	25585	26079	.	+	.	ID=Dca3849.1.exon2;Parent=Dca3849.1
scaffold1139	Augustus	exon	26453	27139	.	+	.	ID=Dca3849.1.exon3;Parent=Dca3849.1
scaffold1139	Augustus	exon	27306	29556	.	+	.	ID=Dca3849.1.exon4;Parent=Dca3849.1
scaffold1139	Augustus	exon	30467	30560	.	+	.	ID=Dca3849.1.exon5;Parent=Dca3849.1