Dca3850.1
Annotation
- 4-exons
- f-1
- sp|Q84RM9_IPOBA#Papain-like cysteine proteinase isoform I#Ipomoea batatas (Sweet potato) (Convolvulus batatas)#Name=PCPI#GO:0004197;GO:0006508#1F1P0C
- Repeat List (scaffold1139)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3850.1 |
4 |
370 |
371 |
72.5 |
367 |
73 |
4e-159
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q84RM9_IPOBA |
5 |
364 |
368 |
97.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3850.1 |
6 |
370 |
371 |
67.38 |
365 |
69 |
9e-150
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G21430.1 |
7 |
361 |
361 |
98.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1139 |
Augus-PASA |
mRNA |
30965 |
33348 |
. |
- |
. |
ID=Dca3850.1;Parent=Dca3850 |
| scaffold1139 |
Augus-PASA |
exon |
30965 |
31236 |
. |
- |
. |
ID=Dca3850.1.exon1;Parent=Dca3850.1 |
| scaffold1139 |
Augus-PASA |
exon |
31507 |
31750 |
. |
- |
. |
ID=Dca3850.1.exon2;Parent=Dca3850.1 |
| scaffold1139 |
Augus-PASA |
exon |
32175 |
32294 |
. |
- |
. |
ID=Dca3850.1.exon3;Parent=Dca3850.1 |
| scaffold1139 |
Augus-PASA |
exon |
32869 |
33348 |
. |
- |
. |
ID=Dca3850.1.exon4;Parent=Dca3850.1 |
