Carnation DB

Dca38501.1

Annotation

5-exons
f-1
sp|B9H2W4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1075519#GO:0005524;GO:0003684;GO:0030983;GO:0045005;GO:0006298#3F2P0C
AT1G65070.2 | Symbols: | DNA mismatch repair protein MutS, type 2 | chr1:24173047-24176244 REVERSE LENGTH=876
Repeat List (scaffold4126)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38501.1	43	902	902	55.87	860	58	0
Target_name	Start	End	Length	Cov(%)
sp\|B9H2W4_POPTR	41	908	908	95.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38501.1	42	902	902	48	861	50	0
Target_name	Start	End	Length	Cov(%)
AT1G65070.2	39	876	876	95.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4126	Augustus	mRNA	28825	34910	.	-	.	ID=Dca38501.1;Parent=Dca38501
scaffold4126	Augustus	exon	28825	29133	.	-	.	ID=Dca38501.1.exon1;Parent=Dca38501.1
scaffold4126	Augustus	exon	30529	30984	.	-	.	ID=Dca38501.1.exon2;Parent=Dca38501.1
scaffold4126	Augustus	exon	32423	32947	.	-	.	ID=Dca38501.1.exon3;Parent=Dca38501.1
scaffold4126	Augustus	exon	33059	33995	.	-	.	ID=Dca38501.1.exon4;Parent=Dca38501.1
scaffold4126	Augustus	exon	34429	34910	.	-	.	ID=Dca38501.1.exon5;Parent=Dca38501.1