Carnation DB

Dca38510.1

Annotation

7-exons
f-1
sp|B9N1S2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_266818#GO:0015297;GO:0015238#2F0P0C
AT3G26590.1 | Symbols: | MATE efflux family protein | chr3:9761927-9765259 REVERSE LENGTH=500
Repeat List (scaffold4128)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38510.1	1	398	423	66.43	398	71	7e-169
Target_name	Start	End	Length	Cov(%)
sp\|B9N1S2_POPTR	77	470	470	83.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38510.1	1	388	423	63.59	388	70	4e-159
Target_name	Start	End	Length	Cov(%)
AT3G26590.1	103	490	500	77.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4128	Augustus	mRNA	14096	16694	.	+	.	ID=Dca38510.1;Parent=Dca38510
scaffold4128	Augustus	exon	14096	14631	.	+	.	ID=Dca38510.1.exon1;Parent=Dca38510.1
scaffold4128	Augustus	exon	15087	15173	.	+	.	ID=Dca38510.1.exon2;Parent=Dca38510.1
scaffold4128	Augustus	exon	15462	15518	.	+	.	ID=Dca38510.1.exon3;Parent=Dca38510.1
scaffold4128	Augustus	exon	15617	15855	.	+	.	ID=Dca38510.1.exon4;Parent=Dca38510.1
scaffold4128	Augustus	exon	16096	16214	.	+	.	ID=Dca38510.1.exon5;Parent=Dca38510.1
scaffold4128	Augustus	exon	16369	16455	.	+	.	ID=Dca38510.1.exon6;Parent=Dca38510.1
scaffold4128	Augustus	exon	16548	16694	.	+	.	ID=Dca38510.1.exon7;Parent=Dca38510.1