Carnation DB

Dca38523.1

Annotation

6-exons
f-1
sp|B9GSY7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_830473#GO:0016620#1F0P0C
Os06t0270900-01 Similar to RF2 (EC 1.2.1.3) (T cytoplasm male sterility restorer factor 2).
Repeat List (scaffold413)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38523.1	152	317	319	36.05	166	69	1e-67
Target_name	Start	End	Length	Cov(%)
sp\|B9GSY7_POPTR	34	200	540	30.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38523.1	151	317	319	34.79	167	67	2e-66
Target_name	Start	End	Length	Cov(%)
Os06t0270900-01	43	209	550	30.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold413	Augustus	mRNA	56232	59269	.	+	.	ID=Dca38523.1;Parent=Dca38523
scaffold413	Augustus	exon	56232	56246	.	+	.	ID=Dca38523.1.exon1;Parent=Dca38523.1
scaffold413	Augustus	exon	56338	56758	.	+	.	ID=Dca38523.1.exon2;Parent=Dca38523.1
scaffold413	Augustus	exon	58346	58480	.	+	.	ID=Dca38523.1.exon3;Parent=Dca38523.1
scaffold413	Augustus	exon	58646	58788	.	+	.	ID=Dca38523.1.exon4;Parent=Dca38523.1
scaffold413	Augustus	exon	58880	59033	.	+	.	ID=Dca38523.1.exon5;Parent=Dca38523.1
scaffold413	Augustus	exon	59178	59269	.	+	.	ID=Dca38523.1.exon6;Parent=Dca38523.1