Dca3856.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1139)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3856.1 |
42 |
354 |
373 |
31.36 |
313 |
33 |
9e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
7 |
364 |
1501 |
23.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3856.1 |
63 |
234 |
373 |
14.47 |
172 |
32 |
6e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
251 |
296 |
58.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1139 |
Augustus |
mRNA |
81013 |
83042 |
. |
- |
. |
ID=Dca3856.1;Parent=Dca3856 |
| scaffold1139 |
Augustus |
exon |
81013 |
81074 |
. |
- |
. |
ID=Dca3856.1.exon1;Parent=Dca3856.1 |
| scaffold1139 |
Augustus |
exon |
81983 |
83042 |
. |
- |
. |
ID=Dca3856.1.exon2;Parent=Dca3856.1 |
