Carnation DB

Dca38583.1

Annotation

6-exons
f-1
sp|D7UA81_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0060g00620#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
sp|B9RFP1_RICCO#Polygalacturonase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1436160#GO:0005576;GO:0047911;GO:0004650;GO:0005975;GO:0007047#2F2P1C
Repeat List (scaffold4137)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38583.1	45	472	472	57.83	428	64	2e-166
Target_name	Start	End	Length	Cov(%)
sp\|D7UA81_VITVI	49	464	464	89.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38583.1	65	472	472	51.9	408	60	1e-151
Target_name	Start	End	Length	Cov(%)
AT1G02460.1	88	488	491	81.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4137	Augustus	mRNA	19427	21772	.	+	.	ID=Dca38583.1;Parent=Dca38583
scaffold4137	Augustus	exon	19427	19810	.	+	.	ID=Dca38583.1.exon1;Parent=Dca38583.1
scaffold4137	Augustus	exon	20067	20234	.	+	.	ID=Dca38583.1.exon2;Parent=Dca38583.1
scaffold4137	Augustus	exon	20376	20420	.	+	.	ID=Dca38583.1.exon3;Parent=Dca38583.1
scaffold4137	Augustus	exon	20625	20832	.	+	.	ID=Dca38583.1.exon4;Parent=Dca38583.1
scaffold4137	Augustus	exon	21025	21106	.	+	.	ID=Dca38583.1.exon5;Parent=Dca38583.1
scaffold4137	Augustus	exon	21241	21772	.	+	.	ID=Dca38583.1.exon6;Parent=Dca38583.1