Carnation DB

Dca38587.1

Annotation

5-exons
f-1
sp|F6H2T5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g02100#unknown#0F0P0C
sp|B9RQZ0_RICCO#Pentatricopeptide repeat-containing protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0707840#unknown#0F0P0C
Repeat List (scaffold4138)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38587.1	15	510	510	60	496	55	7e-155
Target_name	Start	End	Length	Cov(%)
sp\|F6H2T5_VITVI	20	575	575	96.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38587.1	1	510	510	57.25	510	51	1e-145
Target_name	Start	End	Length	Cov(%)
AT2G26280.1	1	567	567	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4138	Augustus	mRNA	4767	9323	.	+	.	ID=Dca38587.1;Parent=Dca38587
scaffold4138	Augustus	exon	4767	5360	.	+	.	ID=Dca38587.1.exon1;Parent=Dca38587.1
scaffold4138	Augustus	exon	5623	6061	.	+	.	ID=Dca38587.1.exon2;Parent=Dca38587.1
scaffold4138	Augus-PASA	exon	6147	6217	.	+	.	ID=Dca38587.1.exon3;Parent=Dca38587.1
scaffold4138	Augus-PASA	exon	8170	8294	.	+	.	ID=Dca38587.1.exon4;Parent=Dca38587.1
scaffold4138	Augus-PASA	exon	9020	9323	.	+	.	ID=Dca38587.1.exon5;Parent=Dca38587.1