Carnation DB

Dca38615.1

Annotation

5-exons
f-1
sp|B9SJ33_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0598070#GO:0005643;GO:0017056;GO:0006913#1F1P1C
AT1G14850.1 | Symbols: NUP155 | nucleoporin 155 | chr1:5116921-5123259 REVERSE LENGTH=1464
Repeat List (scaffold414)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38615.1	1	248	437	28.14	248	43	4e-53
Target_name	Start	End	Length	Cov(%)
sp\|B9SJ33_RICCO	899	1184	1490	19.19

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38615.1	4	243	437	24.94	240	41	1e-43
Target_name	Start	End	Length	Cov(%)
AT1G14850.1	894	1155	1464	17.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold414	Augustus	mRNA	108825	112211	.	-	.	ID=Dca38615.1;Parent=Dca38615
scaffold414	Augustus	exon	108825	109410	.	-	.	ID=Dca38615.1.exon1;Parent=Dca38615.1
scaffold414	Augustus	exon	111202	111282	.	-	.	ID=Dca38615.1.exon2;Parent=Dca38615.1
scaffold414	Augustus	exon	111380	111537	.	-	.	ID=Dca38615.1.exon3;Parent=Dca38615.1
scaffold414	Augustus	exon	111626	111974	.	-	.	ID=Dca38615.1.exon4;Parent=Dca38615.1
scaffold414	Augustus	exon	112072	112211	.	-	.	ID=Dca38615.1.exon5;Parent=Dca38615.1