Carnation DB

Dca38640.1

Annotation

8-exons
f-1
sp|F6GTS8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g02970#GO:0015297;GO:0015238#2F0P0C
Os06t0494400-01 Multi antimicrobial extrusion protein MatE family protein.
Repeat List (scaffold4144)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38640.1	1	358	361	68.97	358	64	2e-142
Target_name	Start	End	Length	Cov(%)
sp\|F6GTS8_VITVI	95	488	493	79.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38640.1	1	359	361	60.11	359	55	8e-125
Target_name	Start	End	Length	Cov(%)
Os06t0494400-01	94	488	491	80.44

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4144	Augustus	mRNA	10203	11985	.	-	.	ID=Dca38640.1;Parent=Dca38640
scaffold4144	Augustus	exon	10203	10262	.	-	.	ID=Dca38640.1.exon1;Parent=Dca38640.1
scaffold4144	Augustus	exon	10367	10453	.	-	.	ID=Dca38640.1.exon2;Parent=Dca38640.1
scaffold4144	Augustus	exon	10540	10658	.	-	.	ID=Dca38640.1.exon3;Parent=Dca38640.1
scaffold4144	Augustus	exon	10740	10831	.	-	.	ID=Dca38640.1.exon4;Parent=Dca38640.1
scaffold4144	Augustus	exon	10940	10978	.	-	.	ID=Dca38640.1.exon5;Parent=Dca38640.1
scaffold4144	Augustus	exon	11090	11146	.	-	.	ID=Dca38640.1.exon6;Parent=Dca38640.1
scaffold4144	Augustus	exon	11257	11343	.	-	.	ID=Dca38640.1.exon7;Parent=Dca38640.1
scaffold4144	Augustus	exon	11441	11985	.	-	.	ID=Dca38640.1.exon8;Parent=Dca38640.1