Dca38648.1
Annotation
- 3-exons
- f-1
- sp|Q9FX79_ARATH#Putative retroelement polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=F19K19.5#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold4147)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38648.1 |
5 |
803 |
826 |
31.59 |
799 |
31 |
1e-101
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FX79_ARATH |
30 |
849 |
1413 |
58.03 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38648.1 |
541 |
764 |
826 |
9.2 |
224 |
34 |
7e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
539 |
762 |
1401 |
15.98 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4147 |
Augustus |
mRNA |
6786 |
10563 |
. |
- |
. |
ID=Dca38648.1;Parent=Dca38648 |
| scaffold4147 |
Augustus |
exon |
6786 |
7674 |
. |
- |
. |
ID=Dca38648.1.exon1;Parent=Dca38648.1 |
| scaffold4147 |
Augustus |
exon |
7895 |
8746 |
. |
- |
. |
ID=Dca38648.1.exon2;Parent=Dca38648.1 |
| scaffold4147 |
Augustus |
exon |
9824 |
10563 |
. |
- |
. |
ID=Dca38648.1.exon3;Parent=Dca38648.1 |
