Carnation DB

Dca38664.1

Annotation

12-exons
f-1
sp|B9HMC7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1085756#unknown#0F0P0C
Os05t0395300-01 Cystathionine beta-synthase, core domain containing protein.
Repeat List (scaffold415)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38664.1	25	471	471	67.51	447	68	3e-171
Target_name	Start	End	Length	Cov(%)
sp\|B9HMC7_POPTR	25	487	500	92.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38664.1	1	466	471	68.78	466	66	5e-163
Target_name	Start	End	Length	Cov(%)
AT4G14240.1	1	480	494	97.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold415	Augustus	mRNA	101268	106515	.	-	.	ID=Dca38664.1;Parent=Dca38664
scaffold415	Augustus	exon	101268	101330	.	-	.	ID=Dca38664.1.exon1;Parent=Dca38664.1
scaffold415	Augustus	exon	101672	101753	.	-	.	ID=Dca38664.1.exon2;Parent=Dca38664.1
scaffold415	Augustus	exon	101852	101898	.	-	.	ID=Dca38664.1.exon3;Parent=Dca38664.1
scaffold415	Augustus	exon	101986	102346	.	-	.	ID=Dca38664.1.exon4;Parent=Dca38664.1
scaffold415	Augustus	exon	102637	102762	.	-	.	ID=Dca38664.1.exon5;Parent=Dca38664.1
scaffold415	Augustus	exon	103027	103094	.	-	.	ID=Dca38664.1.exon6;Parent=Dca38664.1
scaffold415	Augustus	exon	103476	103547	.	-	.	ID=Dca38664.1.exon7;Parent=Dca38664.1
scaffold415	Augustus	exon	103705	103788	.	-	.	ID=Dca38664.1.exon8;Parent=Dca38664.1
scaffold415	Augustus	exon	104404	104517	.	-	.	ID=Dca38664.1.exon9;Parent=Dca38664.1
scaffold415	Augustus	exon	104603	104686	.	-	.	ID=Dca38664.1.exon10;Parent=Dca38664.1
scaffold415	Augustus	exon	105664	105740	.	-	.	ID=Dca38664.1.exon11;Parent=Dca38664.1
scaffold415	Augustus	exon	106278	106515	.	-	.	ID=Dca38664.1.exon12;Parent=Dca38664.1