Dca3868.1
Annotation
- 2-exons
- f-1
- sp|Q9ZVF0_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g01550#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold11397)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3868.1 |
40 |
341 |
359 |
36.21 |
302 |
43 |
1e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZVF0_ARATH |
869 |
1162 |
1449 |
20.28 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3868.1 |
228 |
350 |
359 |
10.58 |
123 |
30 |
2e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
668 |
794 |
857 |
14.81 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11397 |
Augustus |
mRNA |
15682 |
17146 |
. |
+ |
. |
ID=Dca3868.1;Parent=Dca3868 |
| scaffold11397 |
Augustus |
exon |
15682 |
16329 |
. |
+ |
. |
ID=Dca3868.1.exon1;Parent=Dca3868.1 |
| scaffold11397 |
Augustus |
exon |
16715 |
17146 |
. |
+ |
. |
ID=Dca3868.1.exon2;Parent=Dca3868.1 |
