Dca38694.1
Annotation
- 3-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold4157)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38694.1 |
74 |
211 |
220 |
40.9 |
138 |
66 |
8e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
741 |
878 |
896 |
15.4 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38694.1 |
65 |
211 |
220 |
23.63 |
147 |
36 |
3e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1234 |
1378 |
1401 |
10.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4157 |
Augustus |
mRNA |
6131 |
8305 |
. |
- |
. |
ID=Dca38694.1;Parent=Dca38694 |
| scaffold4157 |
Augustus |
exon |
6131 |
6574 |
. |
- |
. |
ID=Dca38694.1.exon1;Parent=Dca38694.1 |
| scaffold4157 |
Augustus |
exon |
7866 |
7958 |
. |
- |
. |
ID=Dca38694.1.exon2;Parent=Dca38694.1 |
| scaffold4157 |
Augustus |
exon |
8180 |
8305 |
. |
- |
. |
ID=Dca38694.1.exon3;Parent=Dca38694.1 |
