Carnation DB

Dca38727.1

Annotation

6-exons
f-1
sp|B9HFX3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_562697#unknown#0F0P0C
Repeat List (scaffold4161)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38727.1	44	157	228	31.57	114	62	2e-35
Target_name	Start	End	Length	Cov(%)
sp\|B9HFX3_POPTR	14	130	344	34.01

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38727.1	76	156	228	23.24	81	66	1e-29
Target_name	Start	End	Length	Cov(%)
AT5G10010.1	140	220	434	18.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4161	Augustus	mRNA	35069	42078	.	+	.	ID=Dca38727.1;Parent=Dca38727
scaffold4161	Augustus	exon	35069	35317	.	+	.	ID=Dca38727.1.exon1;Parent=Dca38727.1
scaffold4161	Augustus	exon	37037	37075	.	+	.	ID=Dca38727.1.exon2;Parent=Dca38727.1
scaffold4161	Augustus	exon	37183	37236	.	+	.	ID=Dca38727.1.exon3;Parent=Dca38727.1
scaffold4161	Augustus	exon	37358	37421	.	+	.	ID=Dca38727.1.exon4;Parent=Dca38727.1
scaffold4161	Augustus	exon	37657	37715	.	+	.	ID=Dca38727.1.exon5;Parent=Dca38727.1
scaffold4161	Augustus	exon	41857	42078	.	+	.	ID=Dca38727.1.exon6;Parent=Dca38727.1