Dca3880.1
Annotation
- 4-exons
- f-1
- sp|B9N5P9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_672191#unknown#0F0P0C
- Repeat List (scaffold114)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3880.1 |
70 |
173 |
173 |
45.66 |
104 |
75 |
4e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N5P9_POPTR |
53 |
158 |
159 |
66.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3880.1 |
75 |
173 |
173 |
39.3 |
99 |
68 |
3e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G56200.1 |
55 |
153 |
154 |
64.28 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold114 |
Augustus |
mRNA |
74164 |
76661 |
. |
+ |
. |
ID=Dca3880.1;Parent=Dca3880 |
| scaffold114 |
Augustus |
exon |
74164 |
74221 |
. |
+ |
. |
ID=Dca3880.1.exon1;Parent=Dca3880.1 |
| scaffold114 |
Augus-PASA |
exon |
74949 |
75145 |
. |
+ |
. |
ID=Dca3880.1.exon2;Parent=Dca3880.1 |
| scaffold114 |
Augus-PASA |
exon |
76212 |
76284 |
. |
+ |
. |
ID=Dca3880.1.exon3;Parent=Dca3880.1 |
| scaffold114 |
Augus-PASA |
exon |
76468 |
76661 |
. |
+ |
. |
ID=Dca3880.1.exon4;Parent=Dca3880.1 |
