Carnation DB

Dca3883.1

Annotation

6-exons
f-1
sp|B9IKE4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1105729#unknown#0F0P0C
AT4G33210.1 | Symbols: SLOMO | F-box family protein | chr4:16015971-16020697 REVERSE LENGTH=990
Repeat List (scaffold114)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3883.1	152	428	428	45.56	277	70	2e-106
Target_name	Start	End	Length	Cov(%)
sp\|B9IKE4_POPTR	138	419	957	29.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3883.1	299	418	428	8.64	120	31	5e-06
Target_name	Start	End	Length	Cov(%)
AT4G33210.1	634	754	990	12.22

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold114	Augustus	mRNA	88926	92384	.	-	.	ID=Dca3883.1;Parent=Dca3883
scaffold114	Augustus	exon	88926	89238	.	-	.	ID=Dca3883.1.exon1;Parent=Dca3883.1
scaffold114	Augustus	exon	89335	89532	.	-	.	ID=Dca3883.1.exon2;Parent=Dca3883.1
scaffold114	Augustus	exon	89619	89718	.	-	.	ID=Dca3883.1.exon3;Parent=Dca3883.1
scaffold114	Augustus	exon	90398	90530	.	-	.	ID=Dca3883.1.exon4;Parent=Dca3883.1
scaffold114	Augustus	exon	90708	90828	.	-	.	ID=Dca3883.1.exon5;Parent=Dca3883.1
scaffold114	Augustus	exon	91963	92384	.	-	.	ID=Dca3883.1.exon6;Parent=Dca3883.1