Carnation DB

Dca3887.1

Annotation

34-exons
f-1
sp|D7STY0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g01990#GO:0016459;GO:0003779;GO:0005524;GO:0003774#3F0P1C
Os06t0488200-01 Similar to Myosin heavy chain (Fragment).
Repeat List (scaffold114)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3887.1	1	1317	1332	75.52	1317	72	0
Target_name	Start	End	Length	Cov(%)
sp\|D7STY0_VITVI	113	1520	1524	92.38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3887.1	1	1318	1332	69.06	1318	66	0
Target_name	Start	End	Length	Cov(%)
AT4G33200.1	121	1510	1522	91.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold114	Augustus	mRNA	109644	129891	.	+	.	ID=Dca3887.1;Parent=Dca3887
scaffold114	Augustus	exon	109644	109720	.	+	.	ID=Dca3887.1.exon1;Parent=Dca3887.1
scaffold114	Augustus	exon	109868	110024	.	+	.	ID=Dca3887.1.exon2;Parent=Dca3887.1
scaffold114	Augustus	exon	111547	111605	.	+	.	ID=Dca3887.1.exon3;Parent=Dca3887.1
scaffold114	Augustus	exon	111843	111999	.	+	.	ID=Dca3887.1.exon4;Parent=Dca3887.1
scaffold114	Augustus	exon	112977	113126	.	+	.	ID=Dca3887.1.exon5;Parent=Dca3887.1
scaffold114	Augustus	exon	113213	113349	.	+	.	ID=Dca3887.1.exon6;Parent=Dca3887.1
scaffold114	Augustus	exon	113531	113677	.	+	.	ID=Dca3887.1.exon7;Parent=Dca3887.1
scaffold114	Augustus	exon	114369	114426	.	+	.	ID=Dca3887.1.exon8;Parent=Dca3887.1
scaffold114	Augustus	exon	114503	114604	.	+	.	ID=Dca3887.1.exon9;Parent=Dca3887.1
scaffold114	Augustus	exon	115402	115439	.	+	.	ID=Dca3887.1.exon10;Parent=Dca3887.1
scaffold114	Augustus	exon	115513	115639	.	+	.	ID=Dca3887.1.exon11;Parent=Dca3887.1
scaffold114	Augustus	exon	115718	115891	.	+	.	ID=Dca3887.1.exon12;Parent=Dca3887.1
scaffold114	Augustus	exon	117344	117453	.	+	.	ID=Dca3887.1.exon13;Parent=Dca3887.1
scaffold114	Augustus	exon	118020	118080	.	+	.	ID=Dca3887.1.exon14;Parent=Dca3887.1
scaffold114	Augustus	exon	118384	118561	.	+	.	ID=Dca3887.1.exon15;Parent=Dca3887.1
scaffold114	Augustus	exon	118858	119063	.	+	.	ID=Dca3887.1.exon16;Parent=Dca3887.1
scaffold114	Augustus	exon	120006	120125	.	+	.	ID=Dca3887.1.exon17;Parent=Dca3887.1
scaffold114	Augustus	exon	122154	122252	.	+	.	ID=Dca3887.1.exon18;Parent=Dca3887.1
scaffold114	Augustus	exon	123450	123671	.	+	.	ID=Dca3887.1.exon19;Parent=Dca3887.1
scaffold114	Augustus	exon	124081	124220	.	+	.	ID=Dca3887.1.exon20;Parent=Dca3887.1
scaffold114	Augustus	exon	124889	125000	.	+	.	ID=Dca3887.1.exon21;Parent=Dca3887.1
scaffold114	Augustus	exon	125336	125386	.	+	.	ID=Dca3887.1.exon22;Parent=Dca3887.1
scaffold114	Augustus	exon	125464	125544	.	+	.	ID=Dca3887.1.exon23;Parent=Dca3887.1
scaffold114	Augustus	exon	125659	125829	.	+	.	ID=Dca3887.1.exon24;Parent=Dca3887.1
scaffold114	Augustus	exon	125947	126090	.	+	.	ID=Dca3887.1.exon25;Parent=Dca3887.1
scaffold114	Augustus	exon	127033	127209	.	+	.	ID=Dca3887.1.exon26;Parent=Dca3887.1
scaffold114	Augustus	exon	127291	127428	.	+	.	ID=Dca3887.1.exon27;Parent=Dca3887.1
scaffold114	Augus-PASA	exon	128036	128106	.	+	.	ID=Dca3887.1.exon28;Parent=Dca3887.1
scaffold114	Augus-PASA	exon	128202	128301	.	+	.	ID=Dca3887.1.exon29;Parent=Dca3887.1
scaffold114	Augus-PASA	exon	128395	128451	.	+	.	ID=Dca3887.1.exon30;Parent=Dca3887.1
scaffold114	Augus-PASA	exon	128548	128604	.	+	.	ID=Dca3887.1.exon31;Parent=Dca3887.1
scaffold114	Augus-PASA	exon	128761	128841	.	+	.	ID=Dca3887.1.exon32;Parent=Dca3887.1
scaffold114	Augus-PASA	exon	129056	129138	.	+	.	ID=Dca3887.1.exon33;Parent=Dca3887.1
scaffold114	Augus-PASA	exon	129735	129891	.	+	.	ID=Dca3887.1.exon34;Parent=Dca3887.1