Dca38872.1
Annotation
- 3-exons
- f-1
- sp|O23864_9ORYZ#Polyprotein#Oryza australiensis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold4189)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38872.1 |
18 |
142 |
142 |
51.4 |
125 |
42 |
4e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O23864_9ORYZ |
766 |
936 |
1317 |
12.98 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38872.1 |
35 |
135 |
142 |
33.8 |
101 |
33 |
1e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
898 |
1046 |
1428 |
10.43 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4189 |
Augustus |
mRNA |
194 |
769 |
. |
- |
. |
ID=Dca38872.1;Parent=Dca38872 |
| scaffold4189 |
Augustus |
exon |
194 |
324 |
. |
- |
. |
ID=Dca38872.1.exon1;Parent=Dca38872.1 |
| scaffold4189 |
Augustus |
exon |
406 |
534 |
. |
- |
. |
ID=Dca38872.1.exon2;Parent=Dca38872.1 |
| scaffold4189 |
Augustus |
exon |
604 |
769 |
. |
- |
. |
ID=Dca38872.1.exon3;Parent=Dca38872.1 |
