Dca38903.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4191)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38903.1 |
28 |
362 |
580 |
21.55 |
335 |
33 |
3e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
7 |
384 |
1501 |
25.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38903.1 |
49 |
218 |
580 |
9.13 |
170 |
31 |
3e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
251 |
296 |
58.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4191 |
Augustus |
mRNA |
4817 |
7821 |
. |
+ |
. |
ID=Dca38903.1;Parent=Dca38903 |
| scaffold4191 |
Augustus |
exon |
4817 |
5824 |
. |
+ |
. |
ID=Dca38903.1.exon1;Parent=Dca38903.1 |
| scaffold4191 |
Augustus |
exon |
7087 |
7821 |
. |
+ |
. |
ID=Dca38903.1.exon2;Parent=Dca38903.1 |
