Dca38927.1
Annotation
- 4-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4195)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38927.1 |
1 |
550 |
564 |
57.8 |
550 |
59 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
970 |
1521 |
1553 |
35.54 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38927.1 |
3 |
549 |
564 |
31.73 |
547 |
33 |
9e-78
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
965 |
1475 |
1539 |
33.2 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4195 |
Augustus |
mRNA |
5755 |
13235 |
. |
+ |
. |
ID=Dca38927.1;Parent=Dca38927 |
| scaffold4195 |
Augustus |
exon |
5755 |
7411 |
. |
+ |
. |
ID=Dca38927.1.exon1;Parent=Dca38927.1 |
| scaffold4195 |
Augustus |
exon |
11401 |
11437 |
. |
+ |
. |
ID=Dca38927.1.exon2;Parent=Dca38927.1 |
| scaffold4195 |
Augustus |
exon |
12503 |
12740 |
. |
+ |
. |
ID=Dca38927.1.exon3;Parent=Dca38927.1 |
| scaffold4195 |
Augustus |
exon |
12825 |
13235 |
. |
+ |
. |
ID=Dca38927.1.exon4;Parent=Dca38927.1 |
