Carnation DB

Dca38939.1

Annotation

5-exons
f-1
sp|B9HPB8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_879030#GO:0042802;GO:0004252;GO:0043086;GO:0006508#2F2P0C
sp|B9S3C2_RICCO#Peptidase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0732470#GO:0005622;GO:0005086;GO:0042802;GO:0004252;GO:0043086;GO:0006508;GO:0032012#3F3P1C
Repeat List (scaffold4199)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38939.1	7	463	464	50.64	457	45	4e-104
Target_name	Start	End	Length	Cov(%)
sp\|B9HPB8_POPTR	195	697	710	70.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38939.1	7	463	464	45.9	457	41	4e-90
Target_name	Start	End	Length	Cov(%)
AT3G46850.1	231	735	736	68.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4199	Augustus	mRNA	1042	2998	.	-	.	ID=Dca38939.1;Parent=Dca38939
scaffold4199	Augustus	exon	1042	1577	.	-	.	ID=Dca38939.1.exon1;Parent=Dca38939.1
scaffold4199	Augustus	exon	1775	1938	.	-	.	ID=Dca38939.1.exon2;Parent=Dca38939.1
scaffold4199	Augustus	exon	2088	2291	.	-	.	ID=Dca38939.1.exon3;Parent=Dca38939.1
scaffold4199	Augustus	exon	2399	2466	.	-	.	ID=Dca38939.1.exon4;Parent=Dca38939.1
scaffold4199	Augustus	exon	2576	2998	.	-	.	ID=Dca38939.1.exon5;Parent=Dca38939.1
scaffold4199	Augustus	mRNA	2395	2998	.	-	.	ID=Dca38939.2;Parent=Dca38939
scaffold4199	Augustus	exon	2395	2466	.	-	.	ID=Dca38939.2.exon1;Parent=Dca38939.2
scaffold4199	Augustus	exon	2576	2998	.	-	.	ID=Dca38939.2.exon2;Parent=Dca38939.2